STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHROOM1Shroom family member 1. (858 aa)    
Predicted Functional Partners:
AFF1
AF4/FMR2 family member 1.
      
 0.640
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
      
 0.516
RTL9
Retrotransposon Gag like 9.
  
     0.516
CABP2
Calcium binding protein 2.
      
 0.515
GRXCR1
Glutaredoxin and cysteine rich domain containing 1.
      
 0.515
CEACAM16
Uncharacterized protein.
      
 0.515
EPB41L5
Band 4.1-like protein 5; May contribute to the correct positioning of tight junctions during the establishment of polarity in epithelial cells.
   
  
 0.498
TMPRSS3
Transmembrane serine protease 3; Belongs to the peptidase S1 family.
   
  
 0.496
AFF4
AF4/FMR2 family member 4.
      
 0.491
VSTM4
V-set and transmembrane domain containing 4.
      
 0.491
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.