STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SHROOM1Shroom family member 1. (858 aa)    
Predicted Functional Partners:
TEX15
Testis expressed 15, meiosis and synapsis associated.
      
 0.578
VSIG10L
V-set and immunoglobulin domain containing 10 like.
      
 0.527
RTL9
Retrotransposon Gag like 9.
  
     0.516
FAAP24
FA core complex associated protein 24.
      
 0.490
ITGAL
Integrin subunit alpha L; Belongs to the integrin alpha chain family.
      
 0.483
MAMSTR
MEF2 activating motif and SAP domain containing transcriptional regulator.
  
     0.471
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
      
 0.470
GRXCR1
Glutaredoxin and cysteine rich domain containing 1.
      
 0.470
AFF1
AF4/FMR2 family member 1.
      
 0.469
SLC36A1
Solute carrier family 36 member 1.
      
 0.465
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.