STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF20Transcription factor 20. (1951 aa)    
Predicted Functional Partners:
BRD1
Bromodomain containing 1.
   
 
 0.747
ZDHHC8
Probable palmitoyltransferase ZDHHC8; Putative palmitoyltransferase involved in glutamatergic transmission; Belongs to the DHHC palmitoyltransferase family. ERF2/ZDHHC9 subfamily.
     
 0.735
CELSR1
Cadherin EGF LAG seven-pass G-type receptor 1; Belongs to the G-protein coupled receptor 2 family.
      
 0.715
PHF14
PHD finger protein 14.
   
 
 0.669
SBF1
SET binding factor 1.
   
 
 0.662
SBF2
SET binding factor 2.
   
 
 0.662
MBD5
Methyl-CpG binding domain protein 5.
   
 0.657
UBTF
Upstream binding transcription factor.
   
 
 0.647
SMARCC2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2.
   
 
 0.642
SETD1A
SET domain containing 1A, histone lysine methyltransferase.
   
 0.639
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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