STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf58Chromosome 6 open reading frame 58. (329 aa)    
Predicted Functional Partners:
CCDC127
Coiled-coil domain containing 127.
      
 0.810
ATP6V1FNB
ATP6V1F neighbor.
      
 0.810
RNF146
Ring finger protein 146.
      
 0.792
CFAP61
Cilia and flagella associated protein 61.
      
 0.773
MMACHC
Metabolism of cobalamin associated C.
      
 0.765
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1; Belongs to the DapA family.
      
 0.757
CST11
Cystatin 11.
      
 0.663
PTPRK
Protein tyrosine phosphatase receptor type K.
      
 0.638
GCAT
Glycine C-acetyltransferase.
      
 0.610
AKAP4
A-kinase anchoring protein 4.
      
 0.591
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.