STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C6orf58Chromosome 6 open reading frame 58. (329 aa)    
Predicted Functional Partners:
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1; Belongs to the DapA family.
   
  
 0.785
CFAP61
Cilia and flagella associated protein 61.
      
 0.782
CCDC127
Coiled-coil domain containing 127.
      
 0.782
ATP6V1FNB
ATP6V1F neighbor.
      
 0.782
MMACHC
Metabolism of cobalamin associated C.
   
  
 0.771
RNF146
Ring finger protein 146.
      
 0.747
CST11
Cystatin 11.
   
  
 0.681
FSIP2
Fibrous sheath interacting protein 2.
      
 0.674
GCAT
Glycine C-acetyltransferase.
      
 0.644
PTPRK
Protein tyrosine phosphatase receptor type K.
      
 0.597
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.