STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEFTEF transcription factor, PAR bZIP family member. (345 aa)    
Predicted Functional Partners:
CLOCK
Clock circadian regulator.
    
 0.804
PER3
Period circadian regulator 3.
   
 0.788
PER2
Period circadian regulator 2.
   
 0.754
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 0.753
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
 0.753
NR1D1
Nuclear receptor subfamily 1 group D member 1.
   
 0.751
NR1D2
Nuclear receptor subfamily 1 group D member 2.
   
 0.739
CRY2
Cryptochrome circadian regulator 2.
   
  
 0.656
NPAS2
Neuronal PAS domain protein 2.
    
 0.654
PASD1
PAS domain containing repressor 1.
    
 0.610
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.