STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKD2L2Polycystin 2 like 2, transient receptor potential cation channel. (620 aa)    
Predicted Functional Partners:
PKDREJ
Polycystin family receptor for egg jelly.
   
 
0.695
PKD1L3
Polycystin 1 like 3, transient receptor potential channel interacting.
   
 
0.691
SPATA24
Spermatogenesis associated 24.
      
 0.681
FAM13B
Family with sequence similarity 13 member B.
      
 0.681
ATP10A
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
  
 0.601
BRD8
Bromodomain containing 8.
    
 
 0.572
CDC23
Cell division cycle 23.
   
  
 0.527
SIL1
SIL1 nucleotide exchange factor.
   
  
 0.526
NUDT9
Nudix hydrolase 9.
      
 0.524
SMIM33
Small integral membrane protein 33.
      
 0.522
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.