STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL22A1Collagen type XXII alpha 1 chain. (1319 aa)    
Predicted Functional Partners:
RHOT2
WD repeat domain 90.
   
 
 0.828
COL21A1
Collagen type XXI alpha 1 chain.
  
 
0.827
COL12A1
Collagen type XII alpha 1 chain.
    
0.818
COL26A1
Collagen type XXVI alpha 1 chain.
    
 0.691
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 
 0.670
COL24A1
Collagen type XXIV alpha 1 chain.
  
0.611
COL23A1
Collagen type XXIII alpha 1 chain.
  
0.584
E2RBZ7_CANLF
Uncharacterized protein.
   
 
 0.582
COL5A2
Collagen type V alpha 2 chain.
  
0.580
COL11A1
Collagen type XI alpha 1 chain.
  
 
0.574
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.