STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL22A1Collagen type XXII alpha 1 chain. (1319 aa)    
Predicted Functional Partners:
E2RBZ7_CANLF
Uncharacterized protein.
    
 0.707
PCOLCE
Procollagen C-endopeptidase enhancer.
    
 
 0.696
RHOT2
WD repeat domain 90.
    
 0.629
AMBN
Ameloblastin.
    
 
 0.623
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.616
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.606
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.603
ARID4B
AT-rich interaction domain 4B.
    
 
 0.597
ARID4A
AT-rich interaction domain 4A.
    
 
 0.597
GAS7
Growth arrest specific 7.
    
 0.582
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.