STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMJD4Jumonji domain containing 4. (353 aa)    
Predicted Functional Partners:
ETF1
Uncharacterized protein.
    
 
 0.552
J9P581_CANLF
eRF1_1 domain-containing protein.
    
 
 0.552
JMJD8
Jumonji domain containing 8.
   
  
 0.539
ILKAP
ILK associated serine/threonine phosphatase.
 
 
    0.521
MCCC2
Methylcrotonoyl-CoA carboxylase 2.
   
  
 0.497
USP39
Ubiquitin specific peptidase 39.
   
  
 0.479
RNF207
Ring finger protein 207.
      
 0.478
ALKBH1
AlkB homolog 1, histone H2A dioxygenase.
   
  
 0.467
HMG20A
High mobility group 20A.
      
 0.463
KDM8
Lysine demethylase 8.
      
 0.457
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.