Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARID3B | HMGA1 | ENSCAFP00000054764 | ENSCAFP00000001724 | AT-rich interaction domain 3B. | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | 0.522 |
| ARID3B | IGF2BP1 | ENSCAFP00000054764 | ENSCAFP00000024866 | AT-rich interaction domain 3B. | Insulin like growth factor 2 mRNA binding protein 1. | 0.560 |
| BANF2 | HMGA1 | ENSCAFP00000008178 | ENSCAFP00000001724 | Barrier to autointegration factor 2. | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | 0.605 |
| HMGA1 | ARID3B | ENSCAFP00000001724 | ENSCAFP00000054764 | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | AT-rich interaction domain 3B. | 0.522 |
| HMGA1 | BANF2 | ENSCAFP00000001724 | ENSCAFP00000008178 | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | Barrier to autointegration factor 2. | 0.605 |
| HMGA1 | IGF2BP1 | ENSCAFP00000001724 | ENSCAFP00000024866 | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | Insulin like growth factor 2 mRNA binding protein 1. | 0.529 |
| HMGA1 | IGF2BP2 | ENSCAFP00000001724 | ENSCAFP00000019639 | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | Insulin like growth factor 2 mRNA binding protein 2. | 0.516 |
| HMGA1 | MYBL1 | ENSCAFP00000001724 | ENSCAFP00000041884 | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | MYB proto-oncogene like 1. | 0.720 |
| HMGA1 | PACSIN1 | ENSCAFP00000001724 | ENSCAFP00000052171 | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | Protein kinase C and casein kinase substrate in neurons 1. | 0.737 |
| HMGA1 | RGR | ENSCAFP00000001724 | ENSCAFP00000046603 | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | Retinal G protein coupled receptor; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. | 0.519 |
| HMGA1 | SCUBE3 | ENSCAFP00000001724 | ENSCAFP00000038328 | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | Signal peptide, CUB domain and EGF like domain containing 3. | 0.620 |
| HMGA1 | SPDEF | ENSCAFP00000001724 | ENSCAFP00000001756 | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | SAM pointed domain containing ETS transcription factor. | 0.651 |
| HMGA1 | TAF11 | ENSCAFP00000001724 | ENSCAFP00000001780 | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | TATA-box binding protein associated factor 11. | 0.563 |
| IGF2BP1 | ARID3B | ENSCAFP00000024866 | ENSCAFP00000054764 | Insulin like growth factor 2 mRNA binding protein 1. | AT-rich interaction domain 3B. | 0.560 |
| IGF2BP1 | HMGA1 | ENSCAFP00000024866 | ENSCAFP00000001724 | Insulin like growth factor 2 mRNA binding protein 1. | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | 0.529 |
| IGF2BP2 | HMGA1 | ENSCAFP00000019639 | ENSCAFP00000001724 | Insulin like growth factor 2 mRNA binding protein 2. | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | 0.516 |
| MYBL1 | HMGA1 | ENSCAFP00000041884 | ENSCAFP00000001724 | MYB proto-oncogene like 1. | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | 0.720 |
| PACSIN1 | HMGA1 | ENSCAFP00000052171 | ENSCAFP00000001724 | Protein kinase C and casein kinase substrate in neurons 1. | High mobility group protein HMG-I/HMG-Y; HMG-I/Y bind preferentially to the minor groove of A+T rich regions in double-stranded DNA. It is suggested that these proteins could function in nucleosome phasing and in the 3'-end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to A+T-rich regions (By similarity); Belongs to the HMGA family. | 0.737 |
| PACSIN1 | SCUBE3 | ENSCAFP00000052171 | ENSCAFP00000038328 | Protein kinase C and casein kinase substrate in neurons 1. | Signal peptide, CUB domain and EGF like domain containing 3. | 0.806 |
| PACSIN1 | SPDEF | ENSCAFP00000052171 | ENSCAFP00000001756 | Protein kinase C and casein kinase substrate in neurons 1. | SAM pointed domain containing ETS transcription factor. | 0.792 |
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