STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM58Tripartite motif containing 58. (487 aa)    
Predicted Functional Partners:
OR2W3
Olfactory receptor.
      
 0.801
NPTX2
Neuronal pentraxin 2.
    
 
 0.793
ISG15
ISG15 ubiquitin like modifier.
   
 
 0.766
LOC485294
Olfactory receptor.
      
 0.643
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
      
 0.573
RIC8B
RIC8 guanine nucleotide exchange factor B.
   
 
 0.562
UBQLN3
Ubiquilin 3.
    
 
 0.560
LOC102152113
Uncharacterized protein.
    
 
 0.537
PDE4C
Phosphodiesterase.
   
 
 0.531
RPS27A
Ubiquitin-like domain-containing protein.
   
   0.528
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.