STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H3Zinc finger CCCH-type containing 3. (923 aa)    
Predicted Functional Partners:
PAPOLG
Poly(A) polymerase gamma.
    
 0.897
YTHDC1
YTH domain containing 1.
     
 0.888
YTHDC2
YTH domain containing 2.
   
 
 0.863
RBM26
RNA binding motif protein 26.
     
 0.856
RBM27
Uncharacterized protein.
   
 
 0.835
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.831
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.822
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.819
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 0.817
ZFC3H1
Zinc finger C3H1-type containing.
     
 0.789
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.