STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TIGD5Tigger transposable element derived 5. (650 aa)    
Predicted Functional Partners:
TIGD4
Tigger transposable element derived 4.
      
 0.694
POGK
Pogo transposable element derived with KRAB domain.
      
 0.678
HARBI1
Harbinger transposase derived 1.
      
 0.648
NAIF1
Nuclear apoptosis inducing factor 1.
   
  
 0.578
MROH6
Maestro heat like repeat family member 6.
  
  
 0.569
SETMAR
Uncharacterized protein.
   
 
 0.505
TIGD3
Tigger transposable element derived 3.
      
 0.470
ZC3H3
Zinc finger CCCH-type containing 3.
      
 0.423
HMGXB3
HMG-box containing 3.
      
 0.406
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.