STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD20Potassium channel tetramerization domain containing 20. (419 aa)    
Predicted Functional Partners:
N4BP2L2
NEDD4 binding protein 2 like 2.
   
  
 0.736
NPTXR
Neuronal pentraxin receptor.
      
 0.717
RUNDC3A
RUN domain containing 3A.
      
 0.716
ARFIP1
ADP ribosylation factor interacting protein 1.
   
  
 0.713
RAB6B
RAB6B, member RAS oncogene family.
   
  
 0.712
ELP2
Elongator acetyltransferase complex subunit 2.
   
  
 0.679
SS18L1
SS18L1 subunit of BAF chromatin remodeling complex.
      
 0.670
PACS1
Phosphofurin acidic cluster sorting protein 1.
   
  
 0.665
RIMS1
Regulating synaptic membrane exocytosis 1.
      
 0.524
RNF170
Ring finger protein 170.
   
  
 0.520
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.