STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASEFRAS and EF-hand domain containing. (818 aa)    
Predicted Functional Partners:
L7N0F7_CANLF
Uncharacterized protein.
      
 0.781
ADM5
Adrenomedullin 5 (putative).
      
 0.775
FAM131B
Family with sequence similarity 131 member B.
   
  
 0.735
FRMD3
FERM domain containing 3.
 
    
 0.733
BICDL2
BICD family like cargo adaptor 2.
   
 
 0.728
TLE4
TLE family member 4, transcriptional corepressor.
    
 
 0.715
TMEM65
Transmembrane protein 65.
      
 0.695
BICDL1
BICD family like cargo adaptor 1.
    
 
 0.694
ZSWIM4
Zinc finger SWIM-type containing 4.
      
 0.687
TTC9
Tetratricopeptide repeat domain 9.
   
  
 0.684
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.