STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMTR1Cap methyltransferase 1. (835 aa)    
Predicted Functional Partners:
TRIM34
Uncharacterized protein.
   
   0.806
CCDC115
Coiled-coil domain containing 115.
      
 0.680
TRMT44
C3H1-type domain-containing protein.
      
 0.675
GLCCI1
Glucocorticoid induced 1.
      
 0.672
SLC35A1
Solute carrier family 35 member A1.
   
  
 0.672
WDR7
WD repeat domain 7.
      
 0.669
SRRM4
Serine/arginine repetitive matrix 4.
      
 0.656
TRMT13
tRNA methyltransferase 13 homolog.
      
 0.650
TRMT1L
tRNA methyltransferase 1 like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.642
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
  
 0.610
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.