STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNPO3Transportin 3. (957 aa)    
Predicted Functional Partners:
SRSF1
Serine and arginine rich splicing factor 1.
   
 
 0.897
CPSF6
Cleavage and polyadenylation specific factor 6.
   
 
 0.861
NUP153
Nucleoporin 153.
   
 
 0.860
IPO7
Importin 7.
   
  
 0.824
EPRS1
Glutamyl-prolyl-tRNA synthetase.
   
    0.746
F13B
Coagulation factor XIII B chain.
      
 0.725
SRSF9
Serine and arginine rich splicing factor 9.
   
 
 0.719
SRSF4
Serine and arginine rich splicing factor 4.
   
 
 0.697
SRSF5
Serine and arginine rich splicing factor 5.
   
 
 0.697
SRSF6
Serine and arginine rich splicing factor 6.
   
 
 0.697
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.