STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNPO3Transportin 3. (957 aa)    
Predicted Functional Partners:
CPSF6
Cleavage and polyadenylation specific factor 6.
   
 0.980
IPO7
Importin 7.
   
 
 0.953
TNPO1
Transportin 1.
   
 0.953
CPSF7
Cleavage and polyadenylation specific factor 7.
   
 0.936
TNPO2
Transportin 2.
   
 0.921
KPNB1
Karyopherin subunit beta 1.
   
 
 0.920
IPO11
Importin 11.
   
 
 0.914
IPO5
Importin 5.
   
 
 0.911
IPO13
Importin 13.
     
 0.892
IPO8
Importin 8.
   
 
 0.884
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.