STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C13H8orf33Uncharacterized protein. (201 aa)    
Predicted Functional Partners:
REXO4
REX4 homolog, 3'-5' exonuclease.
   
   0.608
GRWD1
Glutamate rich WD repeat containing 1.
   
   0.595
ZC3H8
Zinc finger CCCH-type containing 8.
   
   0.549
LYAR
Ly1 antibody reactive.
   
   0.546
ENSCAFP00000055589
zf-LYAR domain-containing protein.
   
   0.546
RRP8
Ribosomal RNA processing 8.
   
   0.533
RPL3
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
   0.488
J9P6X5_CANLF
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
   0.488
LACTB2
Lactamase beta 2.
      
 0.481
RPL18A
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.466
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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