STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISXIntestine specific homeobox. (243 aa)    
Predicted Functional Partners:
BCO1
Beta-carotene oxygenase 1.
      
 0.813
SCARB1
Scavenger receptor class B member 1; Belongs to the CD36 family.
      
 0.477
PLAAT5
Phospholipase A and acyltransferase 5.
      
 0.450
PLAAT1
Phospholipase A and acyltransferase 1.
    
 
 0.423
RDH8
Retinol dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.419
TWIST2
Twist family bHLH transcription factor 2.
   
 
 0.410
LRATD1
LRAT domain containing 1.
      
 0.405
ALX3
ALX homeobox 3.
   
  
 0.405
DBP
D-box binding PAR bZIP transcription factor.
      
 0.403
NFE2L1
Nuclear factor, erythroid 2 like 1.
      
 0.400
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.