RRP36 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

RRP36

Ribosomal RNA processing 36. (246 aa)

Predicted Functional Partners:

ABT1

0.989

UTP3

0.986

KRR1

0.986

UTP25

0.986

RRP9

0.985

UTP6

0.976

UTP18

0.973

BYSL

0.968

DDX10

0.966

NOM1

0.960

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABT1	BYSL	ENSCAFP00000039770	ENSCAFP00000002354	Activator of basal transcription 1.	Bystin like.	0.973
ABT1	DDX10	ENSCAFP00000039770	ENSCAFP00000021138	Activator of basal transcription 1.	RNA helicase.	0.974
ABT1	KRR1	ENSCAFP00000039770	ENSCAFP00000008475	Activator of basal transcription 1.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.973
ABT1	NOM1	ENSCAFP00000039770	ENSCAFP00000038472	Activator of basal transcription 1.	Nucleolar protein with MIF4G domain 1.	0.948
ABT1	RRP36	ENSCAFP00000039770	ENSCAFP00000002570	Activator of basal transcription 1.	Ribosomal RNA processing 36.	0.989
ABT1	RRP9	ENSCAFP00000039770	ENSCAFP00000014797	Activator of basal transcription 1.	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	0.539
ABT1	UTP18	ENSCAFP00000039770	ENSCAFP00000025524	Activator of basal transcription 1.	UTP18 small subunit processome component.	0.961
ABT1	UTP25	ENSCAFP00000039770	ENSCAFP00000017661	Activator of basal transcription 1.	UTP25 small subunit processor component.	0.970
ABT1	UTP3	ENSCAFP00000039770	ENSCAFP00000004314	Activator of basal transcription 1.	UTP3, small subunit processome component.	0.430
ABT1	UTP6	ENSCAFP00000039770	ENSCAFP00000066257	Activator of basal transcription 1.	UTP6 small subunit processome component.	0.961
BYSL	ABT1	ENSCAFP00000002354	ENSCAFP00000039770	Bystin like.	Activator of basal transcription 1.	0.973
BYSL	DDX10	ENSCAFP00000002354	ENSCAFP00000021138	Bystin like.	RNA helicase.	0.926
BYSL	KRR1	ENSCAFP00000002354	ENSCAFP00000008475	Bystin like.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.995
BYSL	NOM1	ENSCAFP00000002354	ENSCAFP00000038472	Bystin like.	Nucleolar protein with MIF4G domain 1.	0.739
BYSL	RRP36	ENSCAFP00000002354	ENSCAFP00000002570	Bystin like.	Ribosomal RNA processing 36.	0.968
BYSL	RRP9	ENSCAFP00000002354	ENSCAFP00000014797	Bystin like.	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	0.995
BYSL	UTP18	ENSCAFP00000002354	ENSCAFP00000025524	Bystin like.	UTP18 small subunit processome component.	0.995
BYSL	UTP25	ENSCAFP00000002354	ENSCAFP00000017661	Bystin like.	UTP25 small subunit processor component.	0.799
BYSL	UTP3	ENSCAFP00000002354	ENSCAFP00000004314	Bystin like.	UTP3, small subunit processome component.	0.994
BYSL	UTP6	ENSCAFP00000002354	ENSCAFP00000066257	Bystin like.	UTP6 small subunit processome component.	0.993