Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMOD2Leiomodin 2. (158 aa)    
Predicted Functional Partners:
KLHL41
Kelch like family member 41.
   
 
 0.594
MYOZ2
Myozenin 2.
   
 
 0.555
CSRP3
Cysteine and glycine rich protein 3.
   
  
 0.552
PXT1
Peroxisomal testis enriched protein 1.
      
 0.472
FBXW4
F-box and WD repeat domain containing 4.
      
 0.468
KLHL40
Kelch like family member 40.
   
   0.435
NRAP
Nebulin related anchoring protein.
   
 
 0.433
SRF
Serum response factor.
      
 0.426
RASSF7
Ras association domain family member 7.
      
 0.426
TMEM182
Transmembrane protein 182.
   
  
 0.412
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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