STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1H9orf85Chromosome 1 C9orf85 homolog. (155 aa)    
Predicted Functional Partners:
BABAM1
BRISC and BRCA1 A complex member 1.
    
   0.684
BABAM2
BRISC and BRCA1 A complex member 2.
    
   0.583
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
   
   0.575
ENSCAFP00000046717
MPN domain-containing protein.
   
   0.575
ABRAXAS2
Abraxas 2, BRISC complex subunit.
    
   0.507
ZFAND5
Zinc finger AN1-type containing 5.
      
 0.467
TMC1
Transmembrane channel-like protein.
    
 
 0.417
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.