STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF7Protein YIPF. (276 aa)    
Predicted Functional Partners:
BEND4
BEN domain containing 4.
      
 0.712
LRRC66
Leucine rich repeat containing 66.
      
 0.712
USP46
Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.
      
 0.710
KCTD8
Potassium channel tetramerization domain containing 8.
   
  
 0.707
GSX2
GS homeobox 2.
   
  
 0.682
SHISA3
Shisa family member 3.
      
 0.676
PDCL2
Phosducin like 2.
   
  
 0.674
HTATSF1
Uncharacterized protein.
      
 0.671
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
 
 0.642
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
   
 
 0.642
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.