STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTBK1Tau tubulin kinase 1. (818 aa)    
Predicted Functional Partners:
LTV1
LTV1 ribosome biogenesis factor.
    
 
 0.639
C24H20orf194
Chromosome 24 C20orf194 homolog.
      
 0.610
VPS26A
VPS26, retromer complex component A.
      
 0.563
CDC7
Cell division cycle 7.
   
 
 0.545
BYSL
Bystin like.
    
 
 0.527
LIMK1
LIM domain kinase 1.
    
 
 0.499
FAM83H
Family with sequence similarity 83 member H.
    
 
 0.498
C10H12orf56
Chromosome 10 C12orf56 homolog.
      
 0.493
VRK3
VRK serine/threonine kinase 3.
      
 0.487
CAPRIN2
Caprin family member 2.
      
 0.487
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.