STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATS1Spermatogenesis associated serine rich 1. (295 aa)    
Predicted Functional Partners:
TMC5
Transmembrane channel-like protein.
      
 0.880
ZNF683
Zinc finger protein 683.
      
 0.867
GTSF1L
Gametocyte specific factor 1 like.
      
 0.830
FSCN3
Fascin.
   
  
 0.829
KNTC1
Kinetochore associated 1.
      
 0.810
PSMG2
Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1. Belongs to the PSMG2 family.
    
   0.807
PSMG1
Proteasome assembly chaperone 1; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg2.
    
   0.806
DNAJC14
J domain-containing protein.
      
 0.771
UBQLN3
Ubiquilin 3.
      
 0.770
KAT6B
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
      
 0.620
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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