STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VWDEVon Willebrand factor D and EGF domains. (1780 aa)    
Predicted Functional Partners:
PRMT6
Protein arginine methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 
 0.610
CDC27
Cell division cycle 27.
    
 0.602
TTC9C
Tetratricopeptide repeat domain 9C.
    
 0.552
MUC21
Uncharacterized protein.
      
 0.551
CADM4
Cell adhesion molecule 4.
   
 0.543
ADAMTS13
ADAM metallopeptidase with thrombospondin type 1 motif 13.
    
 
 0.538
CDHR1
Cadherin related family member 1.
    
 
 0.529
NFAT5
Nuclear factor of activated T cells 5.
   
  
 0.497
SMPDL3A
Acid sphingomyelinase-like phosphodiesterase.
      
 0.474
XIRP1
Xin actin binding repeat containing 1.
    
 0.473
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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