STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF550Zinc finger protein 550. (421 aa)    
Predicted Functional Partners:
USP24
Ubiquitin specific peptidase 24; Belongs to the peptidase C19 family.
      
 0.771
PDGFRL
Platelet derived growth factor receptor like.
    
 
 0.612
UGT2A3
UDPGT domain-containing protein; Belongs to the UDP-glycosyltransferase family.
      
 0.610
PFKFB4
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4.
      
 0.594
HAVCR1-2
Uncharacterized protein.
      
 0.535
TMEM237
Transmembrane protein 237.
    
 0.444
NBR1
NBR1 autophagy cargo receptor.
    
 
 0.441
PKDCC
Protein kinase domain containing, cytoplasmic.
    
 0.428
OR9Q2
Olfactory receptor.
    
 
 0.426
RAMP1
Receptor activity modifying protein 1.
      
 0.426
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.