STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF444Zinc finger protein 444. (325 aa)    
Predicted Functional Partners:
TMEM238
Transmembrane protein 238.
    
 0.626
KMT5C
Lysine methyltransferase 5C.
     
 0.624
C19orf85
Chromosome 19 open reading frame 85.
    
 
 0.624
NLRP9
NLR family pyrin domain containing 9.
    
 0.616
NLRP13
NLR family pyrin domain containing 13.
    
 0.616
ISOC2
Isochorismatase domain containing 2.
    
 
 0.615
CCDC106
Coiled-coil domain containing 106.
      
 0.614
RFPL4A
Uncharacterized protein.
    
 
 0.610
RDH13
Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.610
SBK3
SH3 domain binding kinase family member 3.
      
 0.609
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.