STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RFPL4AUncharacterized protein. (289 aa)    
Predicted Functional Partners:
RFPL4B
Uncharacterized protein.
    
   0.786
C19orf85
Chromosome 19 open reading frame 85.
    
 
 0.624
NLRP9
NLR family pyrin domain containing 9.
   
 0.622
ZNF579
Zinc finger protein 579.
    
 
 0.622
TMEM238
Transmembrane protein 238.
   
 
 0.618
TMEM150B
Transmembrane protein 150B.
   
  
 0.617
FIZ1
FLT3 interacting zinc finger 1.
    
 
 0.615
ZNF580
Zinc finger protein 580.
   
 
 0.614
NLRP13
NLR family pyrin domain containing 13.
    
 0.612
CCDC106
Coiled-coil domain containing 106.
      
 0.612
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.