STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRBD1S1 RNA binding domain 1. (1006 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.896
CAMKMT
Calmodulin-lysine N-methyltransferase.
      
 0.846
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
   
 
 0.810
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.788
SUPT4H1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 
 0.775
ZNF827
Zinc finger protein 827.
    
 
 0.773
ZNF276
Zinc finger protein 276.
    
 
 0.748
POLR2G
RNA polymerase II subunit G.
    
 
 0.737
POLR2E
RNA polymerase II subunit E.
    
 
 0.734
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.733
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.