STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC7ATetratricopeptide repeat domain 7A. (852 aa)    
Predicted Functional Partners:
FAM126A
Family with sequence similarity 126 member A.
    
 
 0.886
ZNF513
Zinc finger protein 513.
      
 0.830
BRAT1
BRCA1 associated ATM activator 1.
      
 0.830
TTC7B
Tetratricopeptide repeat domain 7B.
    
   0.818
LYPD6
LY6/PLAUR domain containing 6.
      
 0.813
TMEM247
Transmembrane protein 247.
      
 0.810
EFR3B
EFR3 homolog B.
   
 
 0.795
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
   
 
 0.779
EFR3A
EFR3 homolog A.
   
 
 0.740
UBR5
Ubiquitin protein ligase E3 component n-recognin 5.
    
 
 0.689
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.