STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SENP6SUMO specific peptidase 6. (1145 aa)    
Predicted Functional Partners:
USPL1
Ubiquitin specific peptidase like 1.
   
 
 0.880
INTS14
Integrator complex subunit 14.
   
  
 0.868
INTS13
Integrator complex subunit 13.
      
 0.849
PRPF19
Pre-mRNA processing factor 19.
   
 
 0.839
SUMO2
Small ubiquitin-related modifier.
   
 
 0.835
ZDBF2
Zinc finger DBF-type containing 2.
    
   0.835
INTS11
Integrator complex subunit 11.
   
  
 0.829
INTS9
Integrator complex subunit 9.
   
  
 0.818
INTS10
Integrator complex subunit 10.
   
  
 0.817
INTS4
Integrator complex subunit 4.
   
  
 0.813
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.