STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRA2ATransformer 2 alpha homolog. (281 aa)    
Predicted Functional Partners:
SRSF3
Serine and arginine rich splicing factor 3.
   
 
 0.886
SRSF1
Serine and arginine rich splicing factor 1.
   
 
 0.865
SRSF4
Serine and arginine rich splicing factor 4.
   
 
 0.813
SRSF7
Serine and arginine rich splicing factor 7.
   
 
 0.805
SRSF6
Serine and arginine rich splicing factor 6.
  
 
 0.803
MSI2
Musashi RNA binding protein 2.
  
 
 
 0.764
SRSF9
Serine and arginine rich splicing factor 9.
   
 
 0.700
SRSF10
Serine and arginine rich splicing factor 10.
   
 
0.700
SRSF2
Serine and arginine rich splicing factor 2.
  
 
0.692
PUM2
Pumilio RNA binding family member 2.
   
 
 0.691
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.