STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMGN3High mobility group nucleosomal binding domain 3. (200 aa)    
Predicted Functional Partners:
IKZF5
IKAROS family zinc finger 5.
      
 0.648
TCF15
Transcription factor 15.
   
  
 0.608
CBFA2T2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
      
 0.561
ADRA2B
Adrenoceptor alpha 2B.
      
 0.561
INO80E
INO80 complex subunit E.
      
 0.526
DRAP1
DR1 associated protein 1.
      
 0.515
ENSCAFP00000046893
Uncharacterized protein.
      
 0.515
INO80D
INO80 complex subunit D.
      
 0.514
ADRA2A
Adrenoceptor alpha 2A; Belongs to the G-protein coupled receptor 1 family.
      
 0.487
RUVBL2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
      
 0.485
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.