STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YTHDC1YTH domain containing 1. (738 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 
 0.862
CSTF1
Cleavage stimulation factor subunit 1.
   
 
 0.858
CSTF3
Cleavage stimulation factor subunit 3.
    
 
 0.852
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 
 0.848
ZC3H13
Zinc finger CCCH-type containing 13.
   
  
 0.821
METTL14
Methyltransferase like 14; Belongs to the MT-A70-like family.
   
 
 0.812
FIP1L1
Factor interacting with PAPOLA and CPSF1.
   
 
 0.755
IGF2BP2
Insulin like growth factor 2 mRNA binding protein 2.
      
 0.706
ALKBH5
AlkB homolog 5, RNA demethylase.
      
 0.705
SRSF3
Serine and arginine rich splicing factor 3.
   
 
 0.701
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.