STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC484344Uncharacterized protein. (570 aa)    
Predicted Functional Partners:
LOC491432
Uncharacterized protein.
     
 0.889
SPATA17
Spermatogenesis associated 17.
      
 0.867
COL23A1
Collagen type XXIII alpha 1 chain.
     
 0.832
MATN2
Matrilin 2.
    
 0.804
PGRMC2
Progesterone receptor membrane component 2; Belongs to the cytochrome b5 family.
      
 0.743
PTPN6
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.645
SIGLEC1
Sialic acid binding Ig like lectin 1.
   
0.586
E2R960_CANLF
Uncharacterized protein.
     
 0.563
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 0.558
ACTC1
Actin alpha cardiac muscle 1.
    
 
 0.521
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.