STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL11ABAF chromatin remodeling complex subunit BCL11A. (834 aa)    
Predicted Functional Partners:
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 
 0.750
LOC609402
Hemoglobin subunit beta; Involved in oxygen transport from the lung to the various peripheral tissues.
      
 0.694
AHSP
Alpha hemoglobin stabilizing protein.
      
 0.691
MTA1
Metastasis associated 1.
    
 
 0.682
HBS1L
HBS1 like translational GTPase.
   
  
 0.678
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 
 0.623
ENSCAFP00000058271
WD_REPEATS_REGION domain-containing protein.
    
 
 0.623
LY6H
Lymphocyte antigen 6 family member H.
   
  
 0.604
HDAC1
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 
 0.600
SLURP1
Secreted LY6/PLAUR domain containing 1.
   
  
 0.560
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.