STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUS10Pseudouridine synthase 10. (532 aa)    
Predicted Functional Partners:
PUS7L
Pseudouridine synthase 7 like.
   
  
 0.843
PUS1
Pseudouridine synthase 1.
   
  
 0.832
ABITRAM
Actin binding transcription modulator.
    
   0.825
RPUSD3
RNA pseudouridine synthase D3.
      
 0.804
PUS7
Pseudouridine synthase 7.
   
  
 0.794
RPUSD4
RNA pseudouridine synthase D4.
      
 0.781
RPUSD1
RNA pseudouridine synthase domain containing 1.
      
 0.774
TRUB2
TruB pseudouridine synthase family member 2.
   
  
 0.769
NHP2
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
      
 0.759
PUS3
Pseudouridine synthase 3.
   
  
 0.744
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.