STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCO2Transmembrane and coiled-coil domains 2. (186 aa)    
Predicted Functional Partners:
LYZL4
Lysozyme like 4.
      
 0.743
ART3
NAD(P)(+)--arginine ADP-ribosyltransferase.
      
 0.610
SLFNL1
Schlafen like 1.
   
    0.605
PRND
Prion like protein doppel.
      
 0.604
RBP1
Retinol binding protein 1.
      
 0.578
PKIB
cAMP-dependent protein kinase inhibitor beta; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.568
TRIT1
tRNA isopentenyltransferase 1; Belongs to the IPP transferase family.
      
 0.562
SPACA7
Sperm acrosome associated 7.
      
 0.526
ENDOD1
Endonuclease domain containing 1.
      
 0.523
SH3D21
SH3 domain containing 21.
   
    0.482
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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