STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MINDY4MINDY lysine 48 deubiquitinase 4. (767 aa)    
Predicted Functional Partners:
TSPYL5
TSPY like 5; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.622
AQP11
Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
   
  
 0.546
FAM228B
Uncharacterized protein.
      
 0.543
GIT2
GIT ArfGAP 2.
      
 0.517
MINDY1
MINDY lysine 48 deubiquitinase 1.
      
 0.485
LRBA
LPS responsive beige-like anchor protein.
      
 0.474
MINDY2
MINDY lysine 48 deubiquitinase 2.
      
 0.400
USP22
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.400
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.