STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD6Neurogenic differentiation factor. (337 aa)    
Predicted Functional Partners:
RASSF10
Ras association domain family member 10.
      
 0.811
TBR1
T-box brain transcription factor 1.
   
 
 0.777
FEZF2
FEZ family zinc finger 2.
   
 
 0.669
GAD1
Glutamate decarboxylase 1; Catalyzes the production of GABA; Belongs to the group II decarboxylase family.
   
  
 0.599
DLX2
Distal-less homeobox 2.
   
  
 0.596
SATB2
DNA-binding protein SATB.
   
  
 0.586
CTDSPL
CTD small phosphatase like.
      
 0.584
GAD2
Glutamate decarboxylase 2; Catalyzes the production of GABA.
      
 0.576
INSM2
INSM transcriptional repressor 2.
   
 
 0.548
SLC35F1
Solute carrier family 35 member F1.
   
  
 0.539
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.