STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVL9AVL9 cell migration associated. (618 aa)    
Predicted Functional Partners:
SCUBE2
DENN domain containing 5A.
      
 0.883
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
      
 0.786
RAB30
RAB30, member RAS oncogene family.
      
 0.762
DENND10
Family with sequence similarity 45 member A.
      
 0.712
RAB33B
RAB33B, member RAS oncogene family.
      
 0.692
DENND11
KIAA1147.
      
 0.692
DENND6A
DENN domain containing 6A.
      
 0.662
RAB33A
RAB33A, member RAS oncogene family.
      
 0.653
RASA3
RAS p21 protein activator 3.
   
  
 0.614
ARHGEF7
Rho guanine nucleotide exchange factor 7.
      
 0.595
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.