STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PGBD2PiggyBac transposable element derived 2. (604 aa)    
Predicted Functional Partners:
ZBED1
Zinc finger BED-type containing 1.
    
 
 0.854
ZNF862
Zinc finger protein 862.
  
   
 0.849
PGBD5
PiggyBac transposable element derived 5.
    
 
 0.839
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
      
 0.830
POGK
Pogo transposable element derived with KRAB domain.
      
 0.812
PGBD1
PiggyBac transposable element derived 1.
    
   0.789
NAIF1
Nuclear apoptosis inducing factor 1.
      
 0.776
THAP9
THAP domain containing 9.
      
 0.746
GNL1
G protein nucleolar 1 (putative).
    
 
 0.696
SCAND1
SCAN domain containing 1.
    
 
 0.668
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.