STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C11H9orf43Chromosome 11 C9orf43 homolog. (580 aa)    
Predicted Functional Partners:
TMCO5A
Transmembrane and coiled-coil domains 5A.
      
 0.670
C27H12orf40
Chromosome 27 C12orf40 homolog.
      
 0.668
TULP2
Tubby like protein 2; Belongs to the TUB family.
      
 0.567
ZFAND4
Uncharacterized protein.
      
 0.567
PKDREJ
Polycystin family receptor for egg jelly.
      
 0.562
C11H9orf131
Chromosome 11 C9orf131 homolog.
      
 0.548
ENSCAFP00000055088
Uncharacterized protein.
      
 0.548
LOC100856762
MAGE domain-containing protein.
      
 0.525
FAM209B
Uncharacterized protein.
      
 0.494
RTF2
Replication termination factor 2.
      
 0.494
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.