STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIPR1EARP complex and GARP complex interacting protein 1. (387 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
    
 
 0.890
VPS54
VPS54 subunit of GARP complex.
    
 
 0.867
VPS51
VPS51 subunit of GARP complex.
   
 
 0.854
VPS50
VPS50 subunit of EARP/GARPII complex.
    
 
 0.840
CCDC186
Coiled-coil domain containing 186.
      
 0.836
RNF144A
RBR-type E3 ubiquitin transferase.
      
 0.833
TRAPPC12
Trafficking protein particle complex 12.
      
 0.813
DCDC2C
Doublecortin domain containing 2C.
      
 0.810
SNTG2
Syntrophin gamma 2.
      
 0.795
CPD
Carboxypeptidase D.
      
 0.775
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.