STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL27A1Collagen type XXVII alpha 1 chain. (1355 aa)    
Predicted Functional Partners:
BEND6
BEN domain containing 6.
      
 0.609
LRFN4
Leucine rich repeat and fibronectin type III domain containing 4.
    
 
 0.607
MTURN
Maturin, neural progenitor differentiation regulator homolog.
      
 0.601
RAVER1
Uncharacterized protein.
      
 0.594
GMFB
Glia maturation factor beta.
      
 0.592
STMN4
Stathmin 4.
    
 
 0.552
DUSP27
Dual specificity phosphatase 27, atypical; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
    
 
 0.547
ITGA10
Integrin subunit alpha 10; Belongs to the integrin alpha chain family.
    
 0.545
EFHB
EF-hand domain family member B.
      
 0.535
KPNA6
Importin subunit alpha; Functions in nuclear protein import.
    
 
 0.534
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.