STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E2R1L8_CANLFUncharacterized protein. (139 aa)    
Predicted Functional Partners:
FIGNL1
Fidgetin like 1; Belongs to the AAA ATPase family.
   
  
 0.664
TEKT3
Tektin 3.
   
   0.654
TCTE1
T-complex-associated-testis-expressed 1.
    
   0.572
TEX37
Testis expressed 37.
    
   0.572
PRR35
Proline rich 35.
      
 0.558
RRP36
Ribosomal RNA processing 36.
      
 0.553
ZPBP
Zona pellucida binding protein.
   
  
 0.553
KLHDC8B
Kelch domain containing 8B.
      
 0.550
CDADC1
Cytidine and dCMP deaminase domain containing 1.
      
 0.547
DNASE2
Deoxyribonuclease 2, lysosomal.
      
 0.529
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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