STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM136AUncharacterized protein. (138 aa)    
Predicted Functional Partners:
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
      
 0.587
SEMA3D
Semaphorin 3D; Belongs to the semaphorin family.
      
 0.555
PRKCB
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
      
 0.525
DTNB
ZZ-type domain-containing protein.
      
 0.515
DTNA
Dystrobrevin alpha.
      
 0.515
ZPLD1
Zona pellucida like domain containing 1.
      
 0.497
KCNA10
Potassium voltage-gated channel subfamily A member 10; Belongs to the potassium channel family.
   
  
 0.487
TECTA
Tectorin alpha.
      
 0.485
UGCG
UDP-glucose ceramide glucosyltransferase.
      
 0.479
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
   
  
 0.441
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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