STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPSF3Cleavage and polyadenylation specific factor 3. (777 aa)    
Predicted Functional Partners:
FIP1L1
Factor interacting with PAPOLA and CPSF1.
   
 0.999
WDR33
WD repeat domain 33.
   
 0.999
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
0.999
CPSF4
Cleavage and polyadenylation specific factor 4.
   
 0.999
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.999
CSTF2
Cleavage stimulation factor subunit 2.
   
 0.996
CSTF2T
RRM domain-containing protein.
   
 0.994
J9NXK3_CANLF
Uncharacterized protein.
   
 0.985
J9P6L8_CANLF
Uncharacterized protein.
   
 0.985
ENSCAFP00000047068
Uncharacterized protein.
   
 0.985
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.