Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UFL1UFM1 specific ligase 1. (791 aa)    
Predicted Functional Partners:
CDK5RAP3
CDK5 regulatory subunit associated protein 3.
   
 
 0.986
DDRGK1
DDRGK domain containing 1.
    
 
 0.967
UFC1
Ubiquitin-fold modifier conjugating enzyme 1.
    
 
 0.942
UFM1
Ubiquitin fold modifier 1.
   
 
 0.927
ENSCAFP00000036648
annotation not available
    
 
 0.784
LOC608703
60S ribosomal protein L26.
    
 
 0.783
RPL26
KOW domain-containing protein.
    
 
 0.782
VRK2
VRK serine/threonine kinase 2.
      
 0.774
UFSP1
UFM1 specific peptidase 1 (inactive).
   
  
 0.753
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
 
 0.713
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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