STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPED1Cadherin like and PC-esterase domain containing 1. (975 aa)    
Predicted Functional Partners:
NELFCD
Negative elongation factor complex member C/D.
      
 0.691
ING3
Inhibitor of growth protein.
 
    
 0.629
MAMSTR
MEF2 activating motif and SAP domain containing transcriptional regulator.
      
 0.620
CPNE8
Copine 8.
      
 0.599
PDCL3
Phosducin like 3.
      
 0.591
WWC2
WW and C2 domain containing 2.
      
 0.524
CTDSPL
CTD small phosphatase like.
      
 0.520
PDZD2
PDZ domain containing 2.
      
 0.514
RBM47
RNA-binding protein 47.
      
 0.500
LMO7
LIM domain 7.
      
 0.488
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.