STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM3CFamily with sequence similarity 3 member C. (227 aa)    
Predicted Functional Partners:
DDX53
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 
 0.800
TMUB1
Transmembrane and ubiquitin like domain containing 1.
   
  
 0.759
PTCHD1
Patched domain containing 1.
      
 0.679
TMEM126A
Transmembrane protein 126A.
      
 0.670
PDCD10
Programmed cell death 10.
   
  
 0.572
GPCPD1
Glycerophosphocholine phosphodiesterase 1.
      
 0.563
BSDC1
BSD domain containing 1.
   
  
 0.510
MSMO1
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
  
 0.489
CXADR
CXADR Ig-like cell adhesion molecule.
      
 0.480
MAD2L1
HORMA domain-containing protein.
   
  
 0.457
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.